{"columns":2,"legend":[{"name":"Xenium lung slide, 377 genes","color":0,"line":"solid","marker":"circle"},{"name":"Xenium Prime 5K slide, 5,078 genes","color":1,"line":"solid","marker":"circle"},{"name":"CosMx WTx colon slide, 18,935 genes","color":2,"marker":"diamond"},{"name":"before optimisation (open, dashed)","color":"ink2","line":"dashed","marker":"circle","open":true},{"name":"1 thread (open, dotted)","color":"ink2","line":"dotted","marker":"square","open":true}],"panels":[{"title":"CPU time (8 threads)","height":290,"x":{"label":"molecules","log":true},"y":{"label":"CPU time, s","log":true,"fmt":"plain"},"series":[{"name":"Xenium lung slide, 377 genes, 8 threads","color":0,"marker":"circle","line":"solid","points":[{"x":99779,"y":73.18,"title":"Xenium lung slide, 100k subset","rows":[["73 s","CPU time"],["99,779","molecules"],["333","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.8","1-min load at start"]]},{"x":249915,"y":149.5,"title":"Xenium lung slide, 250k subset","rows":[["150 s","CPU time"],["249,915","molecules"],["362","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.7","1-min load at start"]]},{"x":499991,"y":262.7,"title":"Xenium lung slide, 500k subset","rows":[["263 s","CPU time"],["499,991","molecules"],["376","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["14.3","1-min load at start"]]},{"x":1000001,"y":579.5,"title":"Xenium lung slide, 1.0M subset","rows":[["579 s","CPU time"],["1,000,001","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["14.5","1-min load at start"]]},{"x":2000000,"y":1456.0,"title":"Xenium lung slide, 2.0M subset","rows":[["24.3 min","CPU time"],["2,000,000","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["10.4","1-min load at start"]]},{"x":4000000,"y":2782.0,"title":"Xenium lung slide, 4.0M subset","rows":[["46.4 min","CPU time"],["4,000,000","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["21.9","1-min load at start"]]},{"x":8000000,"y":6891.0,"title":"Xenium lung slide, 8.0M subset","rows":[["114.8 min","CPU time"],["8,000,000","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["20.0","1-min load at start"]]},{"x":10605483,"y":10050.0,"title":"Xenium lung slide (whole)","rows":[["167.5 min","CPU time"],["10,605,483","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["18.8","1-min load at start"]]}]},{"name":"Xenium lung slide, 377 genes, before optimisation","color":0,"marker":"circle","line":"dashed","open":true,"size":3.5,"points":[{"x":99779,"y":127.8,"title":"Xenium lung slide, 100k subset","rows":[["128 s","CPU time"],["99,779","molecules"],["333","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["10.3","1-min load at start"]]},{"x":249915,"y":236.3,"title":"Xenium lung slide, 250k subset","rows":[["236 s","CPU time"],["249,915","molecules"],["362","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["11.8","1-min load at start"]]},{"x":499991,"y":417.8,"title":"Xenium lung slide, 500k subset","rows":[["418 s","CPU time"],["499,991","molecules"],["376","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["12.1","1-min load at start"]]},{"x":1000001,"y":840.6,"title":"Xenium lung slide, 1.0M subset","rows":[["14.0 min","CPU time"],["1,000,001","molecules"],["377","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["9.0","1-min load at start"]]},{"x":2000000,"y":1803.0,"title":"Xenium lung slide, 2.0M subset","rows":[["30.1 min","CPU time"],["2,000,000","molecules"],["377","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["13.3","1-min load at start"]]},{"x":4000000,"y":3653.0,"title":"Xenium lung slide, 4.0M subset","rows":[["60.9 min","CPU time"],["4,000,000","molecules"],["377","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["10.2","1-min load at start"]]},{"x":8000000,"y":7995.0,"title":"Xenium lung slide, 8.0M subset","rows":[["133.3 min","CPU time"],["8,000,000","molecules"],["377","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["28.2","1-min load at start"]]},{"x":10605483,"y":11700.0,"title":"Xenium lung slide (whole)","rows":[["194.9 min","CPU time"],["10,605,483","molecules"],["377","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["32.0","1-min load at start"]]}]},{"name":"Xenium Prime 5K slide, 5,078 genes, 8 threads","color":1,"marker":"circle","line":"solid","points":[{"x":91896,"y":98.56,"title":"Xenium Prime 5K slide, 92k subset","rows":[["99 s","CPU time"],["91,896","molecules"],["2,188","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.8","1-min load at start"]]},{"x":243328,"y":183.5,"title":"Xenium Prime 5K slide, 243k subset","rows":[["183 s","CPU time"],["243,328","molecules"],["3,100","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.7","1-min load at start"]]},{"x":493827,"y":379.0,"title":"Xenium Prime 5K slide, 494k subset","rows":[["379 s","CPU time"],["493,827","molecules"],["3,674","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["14.6","1-min load at start"]]},{"x":995906,"y":823.9,"title":"Xenium Prime 5K slide, 1.0M subset","rows":[["13.7 min","CPU time"],["995,906","molecules"],["4,358","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["15.1","1-min load at start"]]},{"x":1998693,"y":1985.0,"title":"Xenium Prime 5K slide, 2.0M subset","rows":[["33.1 min","CPU time"],["1,998,693","molecules"],["4,847","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["11.1","1-min load at start"]]},{"x":3999940,"y":4678.0,"title":"Xenium Prime 5K slide, 4.0M subset","rows":[["78.0 min","CPU time"],["3,999,940","molecules"],["5,043","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["39.0","1-min load at start"]]},{"x":8000091,"y":9678.0,"title":"Xenium Prime 5K slide, 8.0M subset","rows":[["161.3 min","CPU time"],["8,000,091","molecules"],["5,078","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["5.3","1-min load at start"]]}]},{"name":"Xenium Prime 5K slide, 5,078 genes, before optimisation","color":1,"marker":"circle","line":"dashed","open":true,"size":3.5,"points":[{"x":91896,"y":158.3,"title":"Xenium Prime 5K slide, 92k subset","rows":[["158 s","CPU time"],["91,896","molecules"],["2,188","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["11.9","1-min load at start"]]},{"x":243328,"y":359.2,"title":"Xenium Prime 5K slide, 243k subset","rows":[["359 s","CPU time"],["243,328","molecules"],["3,100","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["9.4","1-min load at start"]]},{"x":493827,"y":699.1,"title":"Xenium Prime 5K slide, 494k subset","rows":[["11.7 min","CPU time"],["493,827","molecules"],["3,674","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["12.8","1-min load at start"]]},{"x":995906,"y":1383.0,"title":"Xenium Prime 5K slide, 1.0M subset","rows":[["23.1 min","CPU time"],["995,906","molecules"],["4,358","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["13.8","1-min load at start"]]},{"x":1998693,"y":2870.0,"title":"Xenium Prime 5K slide, 2.0M subset","rows":[["47.8 min","CPU time"],["1,998,693","molecules"],["4,847","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["11.2","1-min load at start"]]},{"x":3999940,"y":5763.0,"title":"Xenium Prime 5K slide, 4.0M subset","rows":[["96.1 min","CPU time"],["3,999,940","molecules"],["5,043","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["9.8","1-min load at start"]]},{"x":8000091,"y":13260.0,"title":"Xenium Prime 5K slide, 8.0M subset","rows":[["221.1 min","CPU time"],["8,000,091","molecules"],["5,078","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["20.4","1-min load at start"]]}]},{"name":"CosMx WTx, 18,935 genes","color":2,"marker":"diamond","size":4.5,"points":[{"x":2969193,"y":5896.0,"title":"CosMx WTx colon slide","rows":[["98.3 min","CPU time"],["2,969,193","molecules"],["18,935","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["5.3","1-min load at start"]]}]},{"name":"CosMx WTx, before optimisation","color":2,"marker":"diamond","open":true,"size":4,"points":[{"x":2969193,"y":15420.0,"title":"CosMx WTx colon slide","rows":[["257.0 min","CPU time"],["2,969,193","molecules"],["18,935","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["20.4","1-min load at start"]]}]}],"refs":[{"type":"line","points":[[100000.0,80],[11000000.0,8800]],"dash":"dotted","label":"linear","labelAt":[3000000.0,1100]}]},{"title":"Wall time, 8 and 1 thread","height":290,"x":{"label":"molecules","log":true},"y":{"label":"wall time, s","log":true,"fmt":"plain"},"series":[{"name":"Xenium lung slide, 377 genes, 8 threads","color":0,"marker":"circle","line":"solid","points":[{"x":99779,"y":24.79,"title":"Xenium lung slide, 100k subset","rows":[["25 s","wall time"],["99,779","molecules"],["333","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.8","1-min load at start"]]},{"x":249915,"y":40.52,"title":"Xenium lung slide, 250k subset","rows":[["41 s","wall time"],["249,915","molecules"],["362","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.7","1-min load at start"]]},{"x":499991,"y":59.36,"title":"Xenium lung slide, 500k subset","rows":[["59 s","wall time"],["499,991","molecules"],["376","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["14.3","1-min load at start"]]},{"x":1000001,"y":122.4,"title":"Xenium lung slide, 1.0M subset","rows":[["122 s","wall time"],["1,000,001","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["14.5","1-min load at start"]]},{"x":2000000,"y":296.9,"title":"Xenium lung slide, 2.0M subset","rows":[["297 s","wall time"],["2,000,000","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["10.4","1-min load at start"]]},{"x":4000000,"y":582.9,"title":"Xenium lung slide, 4.0M subset","rows":[["583 s","wall time"],["4,000,000","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["21.9","1-min load at start"]]},{"x":8000000,"y":3470.0,"title":"Xenium lung slide, 8.0M subset","rows":[["57.8 min","wall time"],["8,000,000","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["20.0","1-min load at start"]]},{"x":10605483,"y":3789.0,"title":"Xenium lung slide (whole)","rows":[["63.2 min","wall time"],["10,605,483","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["18.8","1-min load at start"]]}]},{"name":"Xenium lung slide, 377 genes, 1 thread","color":0,"marker":"square","line":"dotted","open":true,"size":3.5,"points":[{"x":99779,"y":97.42,"title":"Xenium lung slide, 100k subset","rows":[["97 s","wall time"],["99,779","molecules"],["333","genes"],["1","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["22.1","1-min load at start"]]},{"x":249915,"y":187.3,"title":"Xenium lung slide, 250k subset","rows":[["187 s","wall time"],["249,915","molecules"],["362","genes"],["1","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["21.1","1-min load at start"]]},{"x":499991,"y":325.1,"title":"Xenium lung slide, 500k subset","rows":[["325 s","wall time"],["499,991","molecules"],["376","genes"],["1","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["19.6","1-min load at start"]]},{"x":1000001,"y":1111.0,"title":"Xenium lung slide, 1.0M subset","rows":[["18.5 min","wall time"],["1,000,001","molecules"],["377","genes"],["1","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["27.6","1-min load at start"]]},{"x":2000000,"y":1995.0,"title":"Xenium lung slide, 2.0M subset","rows":[["33.2 min","wall time"],["2,000,000","molecules"],["377","genes"],["1","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["27.6","1-min load at start"]]}]},{"name":"Xenium Prime 5K slide, 5,078 genes, 8 threads","color":1,"marker":"circle","line":"solid","points":[{"x":91896,"y":43.4,"title":"Xenium Prime 5K slide, 92k subset","rows":[["43 s","wall time"],["91,896","molecules"],["2,188","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.8","1-min load at start"]]},{"x":243328,"y":44.27,"title":"Xenium Prime 5K slide, 243k subset","rows":[["44 s","wall time"],["243,328","molecules"],["3,100","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.7","1-min load at start"]]},{"x":493827,"y":77.11,"title":"Xenium Prime 5K slide, 494k subset","rows":[["77 s","wall time"],["493,827","molecules"],["3,674","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["14.6","1-min load at start"]]},{"x":995906,"y":152.1,"title":"Xenium Prime 5K slide, 1.0M subset","rows":[["152 s","wall time"],["995,906","molecules"],["4,358","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["15.1","1-min load at start"]]},{"x":1998693,"y":353.6,"title":"Xenium Prime 5K slide, 2.0M subset","rows":[["354 s","wall time"],["1,998,693","molecules"],["4,847","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["11.1","1-min load at start"]]},{"x":3999940,"y":1615.0,"title":"Xenium Prime 5K slide, 4.0M subset","rows":[["26.9 min","wall time"],["3,999,940","molecules"],["5,043","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["39.0","1-min load at start"]]},{"x":8000091,"y":1868.0,"title":"Xenium Prime 5K slide, 8.0M subset","rows":[["31.1 min","wall time"],["8,000,091","molecules"],["5,078","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["5.3","1-min load at start"]]}]},{"name":"Xenium Prime 5K slide, 5,078 genes, 1 thread","color":1,"marker":"square","line":"dotted","open":true,"size":3.5,"points":[{"x":91896,"y":136.2,"title":"Xenium Prime 5K slide, 92k subset","rows":[["136 s","wall time"],["91,896","molecules"],["2,188","genes"],["1","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["20.6","1-min load at start"]]},{"x":243328,"y":223.1,"title":"Xenium Prime 5K slide, 243k subset","rows":[["223 s","wall time"],["243,328","molecules"],["3,100","genes"],["1","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["18.9","1-min load at start"]]},{"x":493827,"y":492.0,"title":"Xenium Prime 5K slide, 494k subset","rows":[["492 s","wall time"],["493,827","molecules"],["3,674","genes"],["1","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["34.1","1-min load at start"]]}]},{"name":"CosMx WTx, 18,935 genes","color":2,"marker":"diamond","size":4.5,"points":[{"x":2969193,"y":1169.0,"title":"CosMx WTx colon slide","rows":[["19.5 min","wall time"],["2,969,193","molecules"],["18,935","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["5.3","1-min load at start"]]}]}],"refs":[]},{"title":"Peak memory (8 threads)","height":290,"x":{"label":"molecules","log":true},"y":{"label":"peak memory (RSS), GiB","log":true,"fmt":"plain"},"series":[{"name":"Xenium lung slide, 377 genes, 8 threads","color":0,"marker":"circle","line":"solid","points":[{"x":99779,"y":0.2006,"title":"Xenium lung slide, 100k subset","rows":[["205 MiB","peak RSS"],["99,779","molecules"],["333","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.8","1-min load at start"]]},{"x":249915,"y":0.276,"title":"Xenium lung slide, 250k subset","rows":[["283 MiB","peak RSS"],["249,915","molecules"],["362","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.7","1-min load at start"]]},{"x":499991,"y":0.4002,"title":"Xenium lung slide, 500k subset","rows":[["410 MiB","peak RSS"],["499,991","molecules"],["376","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["14.3","1-min load at start"]]},{"x":1000001,"y":0.6601,"title":"Xenium lung slide, 1.0M subset","rows":[["676 MiB","peak RSS"],["1,000,001","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["14.5","1-min load at start"]]},{"x":2000000,"y":1.154,"title":"Xenium lung slide, 2.0M subset","rows":[["1.15 GiB","peak RSS"],["2,000,000","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["10.4","1-min load at start"]]},{"x":4000000,"y":2.136,"title":"Xenium lung slide, 4.0M subset","rows":[["2.14 GiB","peak RSS"],["4,000,000","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["21.9","1-min load at start"]]},{"x":8000000,"y":4.059,"title":"Xenium lung slide, 8.0M subset","rows":[["4.06 GiB","peak RSS"],["8,000,000","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["20.0","1-min load at start"]]},{"x":10605483,"y":5.319,"title":"Xenium lung slide (whole)","rows":[["5.32 GiB","peak RSS"],["10,605,483","molecules"],["377","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["18.8","1-min load at start"]]}]},{"name":"Xenium lung slide, 377 genes, before optimisation","color":0,"marker":"circle","line":"dashed","open":true,"size":3.5,"points":[{"x":99779,"y":0.2478,"title":"Xenium lung slide, 100k subset","rows":[["254 MiB","peak RSS"],["99,779","molecules"],["333","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["10.3","1-min load at start"]]},{"x":249915,"y":0.3903,"title":"Xenium lung slide, 250k subset","rows":[["400 MiB","peak RSS"],["249,915","molecules"],["362","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["11.8","1-min load at start"]]},{"x":499991,"y":0.6348,"title":"Xenium lung slide, 500k subset","rows":[["650 MiB","peak RSS"],["499,991","molecules"],["376","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["12.1","1-min load at start"]]},{"x":1000001,"y":1.131,"title":"Xenium lung slide, 1.0M subset","rows":[["1.13 GiB","peak RSS"],["1,000,001","molecules"],["377","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["9.0","1-min load at start"]]},{"x":2000000,"y":1.952,"title":"Xenium lung slide, 2.0M subset","rows":[["1.95 GiB","peak RSS"],["2,000,000","molecules"],["377","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["13.3","1-min load at start"]]},{"x":4000000,"y":3.747,"title":"Xenium lung slide, 4.0M subset","rows":[["3.75 GiB","peak RSS"],["4,000,000","molecules"],["377","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["10.2","1-min load at start"]]},{"x":8000000,"y":6.738,"title":"Xenium lung slide, 8.0M subset","rows":[["6.74 GiB","peak RSS"],["8,000,000","molecules"],["377","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["28.2","1-min load at start"]]},{"x":10605483,"y":8.169,"title":"Xenium lung slide (whole)","rows":[["8.17 GiB","peak RSS"],["10,605,483","molecules"],["377","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["32.0","1-min load at start"]]}]},{"name":"Xenium Prime 5K slide, 5,078 genes, 8 threads","color":1,"marker":"circle","line":"solid","points":[{"x":91896,"y":0.2937,"title":"Xenium Prime 5K slide, 92k subset","rows":[["301 MiB","peak RSS"],["91,896","molecules"],["2,188","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.8","1-min load at start"]]},{"x":243328,"y":0.4261,"title":"Xenium Prime 5K slide, 243k subset","rows":[["436 MiB","peak RSS"],["243,328","molecules"],["3,100","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["12.7","1-min load at start"]]},{"x":493827,"y":0.5701,"title":"Xenium Prime 5K slide, 494k subset","rows":[["584 MiB","peak RSS"],["493,827","molecules"],["3,674","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["14.6","1-min load at start"]]},{"x":995906,"y":0.8233,"title":"Xenium Prime 5K slide, 1.0M subset","rows":[["843 MiB","peak RSS"],["995,906","molecules"],["4,358","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["15.1","1-min load at start"]]},{"x":1998693,"y":1.224,"title":"Xenium Prime 5K slide, 2.0M subset","rows":[["1.22 GiB","peak RSS"],["1,998,693","molecules"],["4,847","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["11.1","1-min load at start"]]},{"x":3999940,"y":2.216,"title":"Xenium Prime 5K slide, 4.0M subset","rows":[["2.22 GiB","peak RSS"],["3,999,940","molecules"],["5,043","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["39.0","1-min load at start"]]},{"x":8000091,"y":4.237,"title":"Xenium Prime 5K slide, 8.0M subset","rows":[["4.24 GiB","peak RSS"],["8,000,091","molecules"],["5,078","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["5.3","1-min load at start"]]}]},{"name":"Xenium Prime 5K slide, 5,078 genes, before optimisation","color":1,"marker":"circle","line":"dashed","open":true,"size":3.5,"points":[{"x":91896,"y":0.4438,"title":"Xenium Prime 5K slide, 92k subset","rows":[["454 MiB","peak RSS"],["91,896","molecules"],["2,188","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["11.9","1-min load at start"]]},{"x":243328,"y":0.6635,"title":"Xenium Prime 5K slide, 243k subset","rows":[["679 MiB","peak RSS"],["243,328","molecules"],["3,100","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["9.4","1-min load at start"]]},{"x":493827,"y":0.9596,"title":"Xenium Prime 5K slide, 494k subset","rows":[["983 MiB","peak RSS"],["493,827","molecules"],["3,674","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["12.8","1-min load at start"]]},{"x":995906,"y":1.466,"title":"Xenium Prime 5K slide, 1.0M subset","rows":[["1.47 GiB","peak RSS"],["995,906","molecules"],["4,358","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["13.8","1-min load at start"]]},{"x":1998693,"y":2.33,"title":"Xenium Prime 5K slide, 2.0M subset","rows":[["2.33 GiB","peak RSS"],["1,998,693","molecules"],["4,847","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["11.2","1-min load at start"]]},{"x":3999940,"y":3.765,"title":"Xenium Prime 5K slide, 4.0M subset","rows":[["3.77 GiB","peak RSS"],["3,999,940","molecules"],["5,043","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["9.8","1-min load at start"]]},{"x":8000091,"y":6.869,"title":"Xenium Prime 5K slide, 8.0M subset","rows":[["6.87 GiB","peak RSS"],["8,000,091","molecules"],["5,078","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["20.4","1-min load at start"]]}]},{"name":"CosMx WTx, 18,935 genes","color":2,"marker":"diamond","size":4.5,"points":[{"x":2969193,"y":2.155,"title":"CosMx WTx colon slide","rows":[["2.16 GiB","peak RSS"],["2,969,193","molecules"],["18,935","genes"],["8","threads"],["cpp-0.9.0 (profiling build 20bc45c)","code"],["5.3","1-min load at start"]]}]},{"name":"CosMx WTx, before optimisation","color":2,"marker":"diamond","open":true,"size":4,"points":[{"x":2969193,"y":3.113,"title":"CosMx WTx colon slide","rows":[["3.11 GiB","peak RSS"],["2,969,193","molecules"],["18,935","genes"],["8","threads"],["before optimisation (e45fddc)","code"],["20.4","1-min load at start"]]}]}],"refs":[]}],"table":{"columns":["rung","code","threads","molecules","genes","CPU time","wall time","peak RSS","load"],"rows":[["Xenium lung slide, 100k subset","cpp-0.9.0 (profiling build 20bc45c)",1,"99,779","333","83 s","97 s","197 MiB","22.1"],["Xenium lung slide, 250k subset","cpp-0.9.0 (profiling build 20bc45c)",1,"249,915","362","166 s","187 s","281 MiB","21.1"],["Xenium lung slide, 500k subset","cpp-0.9.0 (profiling build 20bc45c)",1,"499,991","376","294 s","325 s","394 MiB","19.6"],["Xenium lung slide, 1.0M subset","cpp-0.9.0 (profiling build 20bc45c)",1,"1,000,001","377","11.3 min","18.5 min","639 MiB","27.6"],["Xenium lung slide, 2.0M subset","cpp-0.9.0 (profiling build 20bc45c)",1,"2,000,000","377","25.0 min","33.2 min","1.11 GiB","27.6"],["Xenium lung slide, 100k subset","cpp-0.9.0 (profiling build 20bc45c)",8,"99,779","333","73 s","25 s","205 MiB","12.8"],["Xenium lung slide, 250k subset","cpp-0.9.0 (profiling build 20bc45c)",8,"249,915","362","150 s","41 s","283 MiB","12.7"],["Xenium lung slide, 500k subset","cpp-0.9.0 (profiling build 20bc45c)",8,"499,991","376","263 s","59 s","410 MiB","14.3"],["Xenium lung slide, 1.0M subset","cpp-0.9.0 (profiling build 20bc45c)",8,"1,000,001","377","579 s","122 s","676 MiB","14.5"],["Xenium lung slide, 2.0M subset","cpp-0.9.0 (profiling build 20bc45c)",8,"2,000,000","377","24.3 min","297 s","1.15 GiB","10.4"],["Xenium lung slide, 4.0M subset","cpp-0.9.0 (profiling build 20bc45c)",8,"4,000,000","377","46.4 min","583 s","2.14 GiB","21.9"],["Xenium lung slide, 8.0M subset","cpp-0.9.0 (profiling build 20bc45c)",8,"8,000,000","377","114.8 min","57.8 min","4.06 GiB","20.0"],["Xenium lung slide (whole)","cpp-0.9.0 (profiling build 20bc45c)",8,"10,605,483","377","167.5 min","63.2 min","5.32 GiB","18.8"],["Xenium Prime 5K slide, 92k subset","cpp-0.9.0 (profiling build 20bc45c)",1,"91,896","2,188","121 s","136 s","277 MiB","20.6"],["Xenium Prime 5K slide, 243k subset","cpp-0.9.0 (profiling build 20bc45c)",1,"243,328","3,100","201 s","223 s","398 MiB","18.9"],["Xenium Prime 5K slide, 494k subset","cpp-0.9.0 (profiling build 20bc45c)",1,"493,827","3,674","424 s","492 s","558 MiB","34.1"],["Xenium Prime 5K slide, 92k subset","cpp-0.9.0 (profiling build 20bc45c)",8,"91,896","2,188","99 s","43 s","301 MiB","12.8"],["Xenium Prime 5K slide, 243k subset","cpp-0.9.0 (profiling build 20bc45c)",8,"243,328","3,100","183 s","44 s","436 MiB","12.7"],["Xenium Prime 5K slide, 494k subset","cpp-0.9.0 (profiling build 20bc45c)",8,"493,827","3,674","379 s","77 s","584 MiB","14.6"],["Xenium Prime 5K slide, 1.0M subset","cpp-0.9.0 (profiling build 20bc45c)",8,"995,906","4,358","13.7 min","152 s","843 MiB","15.1"],["Xenium Prime 5K slide, 2.0M subset","cpp-0.9.0 (profiling build 20bc45c)",8,"1,998,693","4,847","33.1 min","354 s","1.22 GiB","11.1"],["Xenium Prime 5K slide, 4.0M subset","cpp-0.9.0 (profiling build 20bc45c)",8,"3,999,940","5,043","78.0 min","26.9 min","2.22 GiB","39.0"],["Xenium Prime 5K slide, 8.0M subset","cpp-0.9.0 (profiling build 20bc45c)",8,"8,000,091","5,078","161.3 min","31.1 min","4.24 GiB","5.3"],["CosMx WTx colon slide","cpp-0.9.0 (profiling build 20bc45c)",8,"2,969,193","18,935","98.3 min","19.5 min","2.16 GiB","5.3"],["Xenium lung slide, 100k subset","before optimisation (e45fddc)",1,"99,779","333","88 s","93 s","195 MiB","12.3"],["Xenium lung slide, 250k subset","before optimisation (e45fddc)",1,"249,915","362","176 s","183 s","305 MiB","12.4"],["Xenium lung slide, 500k subset","before optimisation (e45fddc)",1,"499,991","376","298 s","299 s","489 MiB","15.2"],["Xenium lung slide, 1.0M subset","before optimisation (e45fddc)",1,"1,000,001","377","12.4 min","16.9 min","804 MiB","31.6"],["Xenium lung slide, 2.0M subset","before optimisation (e45fddc)",1,"2,000,000","377","26.5 min","31.9 min","1.45 GiB","31.6"],["Xenium lung slide, 100k subset","before optimisation (e45fddc)",8,"99,779","333","128 s","37 s","254 MiB","10.3"],["Xenium lung slide, 250k subset","before optimisation (e45fddc)",8,"249,915","362","236 s","57 s","400 MiB","11.8"],["Xenium lung slide, 500k subset","before optimisation (e45fddc)",8,"499,991","376","418 s","92 s","650 MiB","12.1"],["Xenium lung slide, 1.0M subset","before optimisation (e45fddc)",8,"1,000,001","377","14.0 min","193 s","1.13 GiB","9.0"],["Xenium lung slide, 2.0M subset","before optimisation (e45fddc)",8,"2,000,000","377","30.1 min","383 s","1.95 GiB","13.3"],["Xenium lung slide, 4.0M subset","before optimisation (e45fddc)",8,"4,000,000","377","60.9 min","13.1 min","3.75 GiB","10.2"],["Xenium lung slide, 8.0M subset","before optimisation (e45fddc)",8,"8,000,000","377","133.3 min","42.2 min","6.74 GiB","28.2"],["Xenium lung slide (whole)","before optimisation (e45fddc)",8,"10,605,483","377","194.9 min","70.6 min","8.17 GiB","32.0"],["Xenium Prime 5K slide, 92k subset","before optimisation (e45fddc)",1,"91,896","2,188","122 s","129 s","372 MiB","11.7"],["Xenium Prime 5K slide, 243k subset","before optimisation (e45fddc)",1,"243,328","3,100","273 s","274 s","618 MiB","13.3"],["Xenium Prime 5K slide, 494k subset","before optimisation (e45fddc)",1,"493,827","3,674","594 s","10.9 min","846 MiB","22.8"],["Xenium Prime 5K slide, 92k subset","before optimisation (e45fddc)",8,"91,896","2,188","158 s","56 s","454 MiB","11.9"],["Xenium Prime 5K slide, 243k subset","before optimisation (e45fddc)",8,"243,328","3,100","359 s","128 s","679 MiB","9.4"],["Xenium Prime 5K slide, 494k subset","before optimisation (e45fddc)",8,"493,827","3,674","11.7 min","217 s","983 MiB","12.8"],["Xenium Prime 5K slide, 1.0M subset","before optimisation (e45fddc)",8,"995,906","4,358","23.1 min","411 s","1.47 GiB","13.8"],["Xenium Prime 5K slide, 2.0M subset","before optimisation (e45fddc)",8,"1,998,693","4,847","47.8 min","12.6 min","2.33 GiB","11.2"],["Xenium Prime 5K slide, 4.0M subset","before optimisation (e45fddc)",8,"3,999,940","5,043","96.1 min","22.8 min","3.77 GiB","9.8"],["Xenium Prime 5K slide, 8.0M subset","before optimisation (e45fddc)",8,"8,000,091","5,078","221.1 min","106.9 min","6.87 GiB","20.4"],["CosMx WTx colon slide","before optimisation (e45fddc)",8,"2,969,193","18,935","257.0 min","77.3 min","3.11 GiB","20.4"]]}}